STRINGSTRING
crtB crtB crtI crtI ACS41381.1 ACS41381.1 crtE crtE ctrI ctrI bchP bchP ACS42247.1 ACS42247.1 ACS40675.1 ACS40675.1 ispA ispA ispB ispB bchY bchY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
crtBPhytoene synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (352 aa)    
Predicted Functional Partners:
crtI
Phytoene dehydrogenase (phytoene desaturase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.999
ACS41381.1
Putative phytoene dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.994
crtE
Geranylgeranyl pyrophosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the FPP/GGPP synthase family.
 
 0.984
ctrI
Phytoene desaturase (phytoene dehydrogenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.977
bchP
Geranylgeranyl reductase; Function of strongly homologous gene; enzyme.
 
 
 0.964
ACS42247.1
Terpenoid synthase, putative phytoene synthase; Function of strongly homologous gene; enzyme.
 
  
  0.933
ACS40675.1
FAD-dependent oxidoreductase precursor, putative phytoene dehydrogenase precursor; Function of strongly homologous gene; enzyme.
  
 0.912
ispA
Geranyltranstransferase (farnesyl-diphosphate synthase); Function of strongly homologous gene; enzyme; Belongs to the FPP/GGPP synthase family.
  
 0.900
ispB
Octaprenyl diphosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the FPP/GGPP synthase family.
  
 0.898
bchY
Bacteriochlorophyllide reductase subunit BchY; Function of strongly homologous gene; enzyme.
  
  
 0.839
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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