STRINGSTRING
ACS41015.1 ACS41015.1 ACS41014.1 ACS41014.1 ACS38938.1 ACS38938.1 ACS38937.1 ACS38937.1 rpoN rpoN ACS39283.1 ACS39283.1 fmdD fmdD glnL glnL ACS40789.1 ACS40789.1 ACS42111.1 ACS42111.1 fliM fliM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS41015.1Two-component DctB-like sigma-54 specific transcriptional regulator, Fis subfamily; Function of homologous gene experimentally demonstrated in an other organism; regulator. (450 aa)    
Predicted Functional Partners:
ACS41014.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 0.995
ACS38938.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 0.978
ACS38937.1
Two-component DctB-like sigma-54 specific transcriptional regulator, Fis subfamily; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 
0.904
rpoN
Sigma N (sigma 54) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.775
ACS39283.1
Two-component system, chemotaxis family, sensor kinase CheA; Function of strongly homologous gene; enzyme.
  
 
 0.661
fmdD
Short-chain amide-urea binding porin; Function of strongly homologous gene; factor.
 
      0.660
glnL
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL; Function of strongly homologous gene; enzyme.
 
 0.647
ACS40789.1
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE; Function of strongly homologous gene; regulator.
  
 
 0.579
ACS42111.1
Putative flagellar assembly protein FliH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.
  
  
 0.548
fliM
Flagellar motor switch protein FliM; Function of strongly homologous gene; structure.
  
  
 0.503
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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