STRINGSTRING
ACS41019.1 ACS41019.1 mdh mdh ACS39243.1 ACS39243.1 ACS41018.1 ACS41018.1 ACS41020.1 ACS41020.1 ACS41021.1 ACS41021.1 tadA tadA ACS41512.1 ACS41512.1 gatB-2 gatB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS41019.1Putative cation efflux pump fieF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (295 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
    0.800
ACS39243.1
Putative cation efflux system protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
0.692
ACS41018.1
Hypothetical protein; No homology to any previously reported sequences.
       0.675
ACS41020.1
Hypothetical protein; No homology to any previously reported sequences.
       0.568
ACS41021.1
Hypothetical protein; No homology to any previously reported sequences.
       0.551
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.536
ACS41512.1
Putative cation-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.483
gatB-2
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
       0.452
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.