STRINGSTRING
ACS41061.1 ACS41061.1 htpG htpG alaS alaS ACS40794.1 ACS40794.1 ACS40122.1 ACS40122.1 ACS38500.1 ACS38500.1 ACS42085.1 ACS42085.1 rpoZ rpoZ lptD lptD rpoA rpoA ACS38130.1 ACS38130.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS41061.1Conserved hypothetical protein, TPR repeat precursor; Homologs of previously reported genes of unknown function. (631 aa)    
Predicted Functional Partners:
htpG
Chaperone Hsp90, heat shock protein C 62.5; Molecular chaperone. Has ATPase activity.
   
 0.716
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.677
ACS40794.1
Cytochrome c, class I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.670
ACS40122.1
WD-40 repeat family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.623
ACS38500.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.622
ACS42085.1
Conserved hypothetical protein, ankyrin repeat domain protein; Homologs of previously reported genes of unknown function.
   
 0.618
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
  0.612
lptD
Putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.601
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.585
ACS38130.1
Molecular chaperone, HSP70 class; Function of strongly homologous gene; factor.
  
 0.573
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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