STRINGSTRING
glcF glcF ACS38623.1 ACS38623.1 ACS42846.1 ACS42846.1 sga sga sga-2 sga-2 ACS40501.1 ACS40501.1 ACS38288.1 ACS38288.1 hprA hprA eda eda ACS38088.1 ACS38088.1 ACS38132.1 ACS38132.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcFGlycolate oxidase iron-sulfur subunit; Function of strongly homologous gene; carrier. (465 aa)    
Predicted Functional Partners:
ACS38623.1
Putative glycolate oxidase (glcD-like), FAD-linked subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.994
ACS42846.1
Putative glycolate oxidase subunit GlcE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.983
sga
Serine-glyoxylate aminotransferase (SGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
  0.915
sga-2
Serine-glyoxylate aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
  0.915
ACS40501.1
Putative oxidoreductase, putative 4Fe-4S ferredoxin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.907
ACS38288.1
Putative 2-hydroxyacid dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
hprA
Hydroxypyruvate reductase, NAD(P)H-dependent; Plays a central role in assimilation of carbon. It converts hydroxypyruvate to glycerate as a key step in the serine cycle, and may also play an important role in C2 reactions, by interconverting glyoxylate and glycolate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
eda
Multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.902
ACS38088.1
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
     
  0.900
ACS38132.1
Putative haloacid dehalogenase family hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.900
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.