Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40727.1 | ACS41107.1 | MexAM1_META1p2979 | MexAM1_META1p3370 | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.777 |
ACS41106.1 | ACS41107.1 | MexAM1_META1p3369 | MexAM1_META1p3370 | Hypothetical protein; No homology to any previously reported sequences. | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.401 |
ACS41107.1 | ACS40727.1 | MexAM1_META1p3370 | MexAM1_META1p2979 | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. | 0.777 |
ACS41107.1 | ACS41106.1 | MexAM1_META1p3370 | MexAM1_META1p3369 | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.401 |
ACS41107.1 | ACS41108.1 | MexAM1_META1p3370 | MexAM1_META1p3371 | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein, DUF1328; Homologs of previously reported genes of unknown function. | 0.565 |
ACS41107.1 | ACS41109.1 | MexAM1_META1p3370 | MexAM1_META1p3372 | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative short-chain dehydrogenase/reductase SDR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.561 |
ACS41108.1 | ACS41107.1 | MexAM1_META1p3371 | MexAM1_META1p3370 | Conserved hypothetical protein, DUF1328; Homologs of previously reported genes of unknown function. | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.565 |
ACS41108.1 | ACS41109.1 | MexAM1_META1p3371 | MexAM1_META1p3372 | Conserved hypothetical protein, DUF1328; Homologs of previously reported genes of unknown function. | Putative short-chain dehydrogenase/reductase SDR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.732 |
ACS41109.1 | ACS41107.1 | MexAM1_META1p3372 | MexAM1_META1p3370 | Putative short-chain dehydrogenase/reductase SDR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative chloride channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.561 |
ACS41109.1 | ACS41108.1 | MexAM1_META1p3372 | MexAM1_META1p3371 | Putative short-chain dehydrogenase/reductase SDR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein, DUF1328; Homologs of previously reported genes of unknown function. | 0.732 |