STRINGSTRING
ACS41142.1 ACS41142.1 trmB trmB ACS41255.1 ACS41255.1 ACS40254.1 ACS40254.1 ACS42709.1 ACS42709.1 ACS42259.1 ACS42259.1 ACS42331.1 ACS42331.1 ACS38729.1 ACS38729.1 pheT pheT ACS38527.1 ACS38527.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
ACS41142.1Conserved hypothetical protein (DUF88); Homologs of previously reported genes of unknown function. (168 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)- methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.803
ACS41255.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.594
ACS40254.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.576
ACS42709.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.543
ACS42259.1
Putative transcriptional regulator, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.495
ACS42331.1
Metal-dependent phosphohydrolase; Function of strongly homologous gene; enzyme.
  
     0.466
ACS38729.1
Putative transcriptional regulator, XRE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.460
pheT
Phenylalanine tRNA synthetase, beta-subunit; Function of strongly homologous gene; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.443
ACS38527.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
   0.405
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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