STRINGSTRING
rimI rimI ACS41148.1 ACS41148.1 ACS41150.1 ACS41150.1 ACS41147.1 ACS41147.1 proS proS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
rimIRibosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. (173 aa)    
Predicted Functional Partners:
ACS41148.1
Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme.
  
 
 0.885
ACS41150.1
Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.735
ACS41147.1
NifU-like protein; Function of strongly homologous gene; cell process.
       0.534
proS
proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.
 
   
 0.408
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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