Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41147.1 | ACS41148.1 | MexAM1_META1p3410 | MexAM1_META1p3411 | NifU-like protein; Function of strongly homologous gene; cell process. | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | 0.534 |
ACS41147.1 | ACS41150.1 | MexAM1_META1p3410 | MexAM1_META1p3413 | NifU-like protein; Function of strongly homologous gene; cell process. | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.496 |
ACS41147.1 | rimI | MexAM1_META1p3410 | MexAM1_META1p3412 | NifU-like protein; Function of strongly homologous gene; cell process. | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | 0.534 |
ACS41148.1 | ACS41147.1 | MexAM1_META1p3411 | MexAM1_META1p3410 | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | NifU-like protein; Function of strongly homologous gene; cell process. | 0.534 |
ACS41148.1 | ACS41150.1 | MexAM1_META1p3411 | MexAM1_META1p3413 | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.754 |
ACS41148.1 | rimI | MexAM1_META1p3411 | MexAM1_META1p3412 | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | 0.885 |
ACS41150.1 | ACS41147.1 | MexAM1_META1p3413 | MexAM1_META1p3410 | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | NifU-like protein; Function of strongly homologous gene; cell process. | 0.496 |
ACS41150.1 | ACS41148.1 | MexAM1_META1p3413 | MexAM1_META1p3411 | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | 0.754 |
ACS41150.1 | rimI | MexAM1_META1p3413 | MexAM1_META1p3412 | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | 0.735 |
proS | rimI | MexAM1_META1p0837 | MexAM1_META1p3412 | proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | 0.408 |
rimI | ACS41147.1 | MexAM1_META1p3412 | MexAM1_META1p3410 | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | NifU-like protein; Function of strongly homologous gene; cell process. | 0.534 |
rimI | ACS41148.1 | MexAM1_META1p3412 | MexAM1_META1p3411 | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | Peptidase M22, glycoprotease; Function of strongly homologous gene; enzyme. | 0.885 |
rimI | ACS41150.1 | MexAM1_META1p3412 | MexAM1_META1p3413 | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | Putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.735 |
rimI | proS | MexAM1_META1p3412 | MexAM1_META1p0837 | Ribosomal-protein-alanine N-acetyltransferase; Function of strongly homologous gene; enzyme. | proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.408 |