Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41203.1 | ACS41204.1 | MexAM1_META1p3466 | MexAM1_META1p3467 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.532 |
ACS41203.1 | ACS41205.1 | MexAM1_META1p3466 | MexAM1_META1p3468 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.532 |
ACS41203.1 | thrC | MexAM1_META1p3466 | MexAM1_META1p3465 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.549 |
ACS41204.1 | ACS41203.1 | MexAM1_META1p3467 | MexAM1_META1p3466 | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.532 |
ACS41204.1 | ACS41205.1 | MexAM1_META1p3467 | MexAM1_META1p3468 | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.874 |
ACS41204.1 | thrC | MexAM1_META1p3467 | MexAM1_META1p3465 | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.453 |
ACS41205.1 | ACS41203.1 | MexAM1_META1p3468 | MexAM1_META1p3466 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.532 |
ACS41205.1 | ACS41204.1 | MexAM1_META1p3468 | MexAM1_META1p3467 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.874 |
ACS41205.1 | thrC | MexAM1_META1p3468 | MexAM1_META1p3465 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.444 |
thrC | ACS41203.1 | MexAM1_META1p3465 | MexAM1_META1p3466 | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.549 |
thrC | ACS41204.1 | MexAM1_META1p3465 | MexAM1_META1p3467 | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative surfeit locus 1 family protein (surf1-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.453 |
thrC | ACS41205.1 | MexAM1_META1p3465 | MexAM1_META1p3468 | Threonine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.444 |