Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40481.1 | ACS41221.1 | MexAM1_META1p2716 | MexAM1_META1p3484 | Conserved hypothetical protein, UPF0301 protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0301 (AlgH) family. | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.478 |
ACS41220.1 | ACS41221.1 | MexAM1_META1p3483 | MexAM1_META1p3484 | Hypothetical protein; No homology to any previously reported sequences. | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.478 |
ACS41220.1 | galE | MexAM1_META1p3483 | MexAM1_META1p3485 | Hypothetical protein; No homology to any previously reported sequences. | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.478 |
ACS41221.1 | ACS40481.1 | MexAM1_META1p3484 | MexAM1_META1p2716 | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein, UPF0301 protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0301 (AlgH) family. | 0.478 |
ACS41221.1 | ACS41220.1 | MexAM1_META1p3484 | MexAM1_META1p3483 | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.478 |
ACS41221.1 | galE | MexAM1_META1p3484 | MexAM1_META1p3485 | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.800 |
ACS41221.1 | galU | MexAM1_META1p3484 | MexAM1_META1p3486 | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme. | 0.560 |
galE | ACS41220.1 | MexAM1_META1p3485 | MexAM1_META1p3483 | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein; No homology to any previously reported sequences. | 0.478 |
galE | ACS41221.1 | MexAM1_META1p3485 | MexAM1_META1p3484 | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.800 |
galE | galU | MexAM1_META1p3485 | MexAM1_META1p3486 | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme. | 0.979 |
galU | ACS41221.1 | MexAM1_META1p3486 | MexAM1_META1p3484 | Glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme. | Putative membrane bound lytic murein transglycosylase B, mltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.560 |
galU | galE | MexAM1_META1p3486 | MexAM1_META1p3485 | Glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme. | UDP-galactose 4-epimerase; Function of strongly homologous gene; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.979 |