STRINGSTRING
mepA mepA ACS40700.1 ACS40700.1 ACS41804.1 ACS41804.1 ACS39558.1 ACS39558.1 ACS39559.1 ACS39559.1 ACS41235.1 ACS41235.1 aroC aroC ACS42449.1 ACS42449.1 ACS41232.1 ACS41232.1 ACS41233.1 ACS41233.1 ACS40701.1 ACS40701.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepAMurein DD-endopeptidase, penicillin-insensitive; Function of strongly homologous gene; enzyme. (309 aa)    
Predicted Functional Partners:
ACS40700.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.740
ACS41804.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.
 
    0.733
ACS39558.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.660
ACS39559.1
Conserved hypothetical protein, putative membrane protein; Homologs of previously reported genes of unknown function.
  
     0.631
ACS41235.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.581
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
  
 0.578
ACS42449.1
Putative Glucokinase (Glucose kinase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the bacterial glucokinase family.
      0.568
ACS41232.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.541
ACS41233.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.541
ACS40701.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.498
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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