Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41249.1 | ACS42450.1 | MexAM1_META1p3513 | MexAM1_META1p4841 | Hypothetical protein; No homology to any previously reported sequences. | Putative trehalose-6-phosphate phosphatase (otsB); Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.761 |
ACS41249.1 | nhaA | MexAM1_META1p3513 | MexAM1_META1p1236 | Hypothetical protein; No homology to any previously reported sequences. | Sodium-proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.695 |
ACS41249.1 | nhaA-2 | MexAM1_META1p3513 | MexAM1_META1p3501 | Hypothetical protein; No homology to any previously reported sequences. | Sodium:proton antiporter (NhaA family); Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.695 |
ACS41249.1 | sodB | MexAM1_META1p3513 | MexAM1_META1p3512 | Hypothetical protein; No homology to any previously reported sequences. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.401 |
ACS42450.1 | ACS41249.1 | MexAM1_META1p4841 | MexAM1_META1p3513 | Putative trehalose-6-phosphate phosphatase (otsB); Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Hypothetical protein; No homology to any previously reported sequences. | 0.761 |
nhaA | ACS41249.1 | MexAM1_META1p1236 | MexAM1_META1p3513 | Sodium-proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Hypothetical protein; No homology to any previously reported sequences. | 0.695 |
nhaA-2 | ACS41249.1 | MexAM1_META1p3501 | MexAM1_META1p3513 | Sodium:proton antiporter (NhaA family); Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Hypothetical protein; No homology to any previously reported sequences. | 0.695 |
sodB | ACS41249.1 | MexAM1_META1p3512 | MexAM1_META1p3513 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Hypothetical protein; No homology to any previously reported sequences. | 0.401 |