STRINGSTRING
ACS41298.1 ACS41298.1 ssuB-2 ssuB-2 ACS41297.1 ACS41297.1 ACS41289.1 ACS41289.1 ACS41302.1 ACS41302.1 ACS41300.1 ACS41300.1 ACS41301.1 ACS41301.1 nahD nahD ACS38841.1 ACS38841.1 ACS39495.1 ACS39495.1 ACS39508.1 ACS39508.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS41298.1ABC family transporter, periplasmic protein; Function of strongly homologous gene; transporter. (480 aa)    
Predicted Functional Partners:
ssuB-2
ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter.
 
  
 0.970
ACS41297.1
ABC superfamily transporter membrane protein; Function of strongly homologous gene; transporter.
 
  
 0.957
ACS41289.1
Putative extracellular solute-binding protein, putative sulfonate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
  0.900
ACS41302.1
Putative Succinate dehydrogenase flavoprotein subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.782
ACS41300.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.780
ACS41301.1
Putative ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.775
nahD
2-hydroxychromene-2-carboxylate isomerase (HCCA isomerase); Function of strongly homologous gene; enzyme.
       0.773
ACS38841.1
ABC transporter, ATPase; Function of strongly homologous gene; transporter.
   
  
 0.745
ACS39495.1
Putative ATP-binding component of ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
  
 0.745
ACS39508.1
ABC family transporter substrate-binding protein; Function of strongly homologous gene; transporter.
   
  
 0.745
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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