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fmdA fmdA ACS38830.1 ACS38830.1 oxdC oxdC ACS41313.1 ACS41313.1 ACS38212.1 ACS38212.1 glnII glnII glnA glnA ACS41751.1 ACS41751.1 ACS42547.1 ACS42547.1 fdh3A fdh3A fdh3B fdh3B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
fmdAFormamidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (409 aa)    
Predicted Functional Partners:
ACS38830.1
Putative nitrilase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.922
oxdC
Oxalate decarboxylase; Function of strongly homologous gene; enzyme.
 
  
  0.917
ACS41313.1
Putative formamidase regulatory protein, FmdB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.915
ACS38212.1
Putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.910
glnII
Glutamine synthetase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.901
glnA
Glutamine synthetase, type I; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.901
ACS41751.1
Putative glutamine synthetase III (glnT); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glutamine synthetase family.
     
 0.901
ACS42547.1
Putative ferredoxin--nitrite reductase (nirA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.901
fdh3A
Formate dehydrogenase alpha subunit precursor (tat pathway signal); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.900
fdh3B
Formate dehydrogenase iron-sulfur (beta) subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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