STRINGSTRING
phaR phaR phaC phaC phaA phaA phaB phaB depB depB depA depA mcmA mcmA ACS41800.1 ACS41800.1 pta pta pdhB pdhB hbd hbd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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phaRPutative regulator for granule-associated proteins, PHB biosynthesis and acetyl-CoA flux; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (203 aa)    
Predicted Functional Partners:
phaC
Polyhydroxyalkanoate synthase subunit PhaC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.936
phaA
Beta-ketothiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.861
phaB
acetoacetyl-CoA reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.861
depB
PHB depolymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.695
depA
Intracellular PHB depolymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.597
mcmA
methylmalonyl-CoA mutase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.595
ACS41800.1
Intracellular PHB depolymerase, polyhydroxyalkanoate depolymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.559
pta
Phosphate acetyltransferase; Function of strongly homologous gene; enzyme.
  
   
 0.555
pdhB
Pyruvate dehydrogenase E1 beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
      
 0.546
hbd
D-beta-hydroxybutyrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.517
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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