Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41584.1 | ACS41585.1 | MexAM1_META1p3900 | MexAM1_META1p3901 | Putative sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.467 |
ACS41584.1 | ACS41586.1 | MexAM1_META1p3900 | MexAM1_META1p3902 | Putative sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.457 |
ACS41585.1 | ACS41584.1 | MexAM1_META1p3901 | MexAM1_META1p3900 | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Putative sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.467 |
ACS41585.1 | ACS41586.1 | MexAM1_META1p3901 | MexAM1_META1p3902 | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.993 |
ACS41585.1 | ACS41587.1 | MexAM1_META1p3901 | MexAM1_META1p3903 | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.549 |
ACS41586.1 | ACS41584.1 | MexAM1_META1p3902 | MexAM1_META1p3900 | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Putative sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.457 |
ACS41586.1 | ACS41585.1 | MexAM1_META1p3902 | MexAM1_META1p3901 | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.993 |
ACS41586.1 | ACS41587.1 | MexAM1_META1p3902 | MexAM1_META1p3903 | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.549 |
ACS41587.1 | ACS41585.1 | MexAM1_META1p3903 | MexAM1_META1p3901 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative Inner membrane protein yohK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.549 |
ACS41587.1 | ACS41586.1 | MexAM1_META1p3903 | MexAM1_META1p3902 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative Holin-like protein cidA 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. | 0.549 |