STRINGSTRING
lptD lptD ACS41590.1 ACS41590.1 ACS41591.1 ACS41591.1 ACS40243.1 ACS40243.1 ACS40242.1 ACS40242.1 ACS42720.1 ACS42720.1 bamA bamA ACS42054.1 ACS42054.1 ACS42774.1 ACS42774.1 ACS40102.1 ACS40102.1 ACS40817.1 ACS40817.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptDPutative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (876 aa)    
Predicted Functional Partners:
ACS41590.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.917
ACS41591.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.892
ACS40243.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.881
ACS40242.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.801
ACS42720.1
Putative peptidyl-prolyl cis-trans isomerse D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.794
bamA
Putative outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.770
ACS42054.1
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
   
 0.763
ACS42774.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.746
ACS40102.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.745
ACS40817.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.743
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.