Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39663.1 | ACS41878.1 | MexAM1_META1p1821 | MexAM1_META1p4241 | Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.785 |
ACS39663.1 | acd | MexAM1_META1p1821 | MexAM1_META1p5048 | Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. | 0.589 |
ACS41246.1 | ACS41878.1 | MexAM1_META1p3510 | MexAM1_META1p4241 | Haloacid dehalogenase, type II; Function of strongly homologous gene; enzyme. | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.909 |
ACS41878.1 | ACS39663.1 | MexAM1_META1p4241 | MexAM1_META1p1821 | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.785 |
ACS41878.1 | ACS41246.1 | MexAM1_META1p4241 | MexAM1_META1p3510 | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Haloacid dehalogenase, type II; Function of strongly homologous gene; enzyme. | 0.909 |
ACS41878.1 | acd | MexAM1_META1p4241 | MexAM1_META1p5048 | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. | 0.508 |
ACS41878.1 | ttuC | MexAM1_META1p4241 | MexAM1_META1p5136 | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.495 |
acd | ACS39663.1 | MexAM1_META1p5048 | MexAM1_META1p1821 | acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. | Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.589 |
acd | ACS41878.1 | MexAM1_META1p5048 | MexAM1_META1p4241 | acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.508 |
ttuC | ACS41878.1 | MexAM1_META1p5136 | MexAM1_META1p4241 | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative alpha/beta hydrolase, putative haloacetate dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.495 |