Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41882.1 | ACS41883.1 | MexAM1_META1p4245 | MexAM1_META1p4246 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; Doubtful CDS. | 0.543 |
ACS41882.1 | purD | MexAM1_META1p4245 | MexAM1_META1p4244 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | 0.550 |
ACS41882.1 | tadA | MexAM1_META1p4245 | MexAM1_META1p4243 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.536 |
ACS41883.1 | ACS41882.1 | MexAM1_META1p4246 | MexAM1_META1p4245 | Hypothetical protein; Doubtful CDS. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.543 |
ACS41883.1 | purD | MexAM1_META1p4246 | MexAM1_META1p4244 | Hypothetical protein; Doubtful CDS. | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | 0.401 |
purD | ACS41882.1 | MexAM1_META1p4244 | MexAM1_META1p4245 | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.550 |
purD | ACS41883.1 | MexAM1_META1p4244 | MexAM1_META1p4246 | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | Hypothetical protein; Doubtful CDS. | 0.401 |
purD | tadA | MexAM1_META1p4244 | MexAM1_META1p4243 | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.759 |
tadA | ACS41882.1 | MexAM1_META1p4243 | MexAM1_META1p4245 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.536 |
tadA | purD | MexAM1_META1p4243 | MexAM1_META1p4244 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphoribosylglycinamide synthetase (GAR synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family. | 0.759 |