STRINGSTRING
ACS41885.1 ACS41885.1 ACS40747.1 ACS40747.1 prs prs ACS42773.1 ACS42773.1 ACS42114.1 ACS42114.1 icd icd rpoZ rpoZ rpoB rpoB rpoC rpoC ACS38609.1 ACS38609.1 nusA nusA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS41885.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (75 aa)    
Predicted Functional Partners:
ACS40747.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.620
prs
Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
  
 0.612
ACS42773.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.587
ACS42114.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.585
icd
NADP-dependent isocitrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
     0.582
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.502
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.497
rpoC
RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.497
ACS38609.1
Hypothetical protein; No homology to any previously reported sequences.
   
   0.496
nusA
Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination.
   
   0.496
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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