STRINGSTRING
ACS41936.1 ACS41936.1 ACS41935.1 ACS41935.1 ACS38263.1 ACS38263.1 ACS38920.1 ACS38920.1 ACS41934.1 ACS41934.1 ACS42366.1 ACS42366.1 ACS40424.1 ACS40424.1 ACS40782.1 ACS40782.1 ragD ragD ACS42365.1 ACS42365.1 ACS40385.1 ACS40385.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACS41936.1Efflux transporter, AcrB/AcrD/AcrF family protein; Function of strongly homologous gene; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1046 aa)    
Predicted Functional Partners:
ACS41935.1
Putative efflux transporter, membrane fusion protein subunit precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     0.946
ACS38263.1
Putative HlyD family secretion protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     0.788
ACS38920.1
Putative heavy metal efflux pump, HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.595
ACS41934.1
Hypothetical protein; No homology to any previously reported sequences.
       0.473
ACS42366.1
RND efflux transporter, membrane fusion protein subunit precursor; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.462
ACS40424.1
Putative secretion protein, putative RND family efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.448
ACS40782.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   0.442
ragD
Efflux transporter, RND family, membrane fusion protein subunit; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.440
ACS42365.1
RND efflux transporter, membrane fusion protein subunit; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.439
ACS40385.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.424
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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