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flbD flbD ACS42111.1 ACS42111.1 fliG-2 fliG-2 rpoN rpoN fliM-2 fliM-2 ACS42116.1 ACS42116.1 fliF-2 fliF-2 fliY fliY ACS41006.1 ACS41006.1 fliL-2 fliL-2 ACS38297.1 ACS38297.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
flbDTwo-component flagellar sigma-54 dependent transcriptional regulator, Fis family; Function of strongly homologous gene; regulator. (457 aa)    
Predicted Functional Partners:
ACS42111.1
Putative flagellar assembly protein FliH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.
 
  
 0.874
fliG-2
Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.807
rpoN
Sigma N (sigma 54) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.796
fliM-2
Flagellar motor switch protein FliM; Function of strongly homologous gene; structure.
 
  
 0.796
ACS42116.1
Putative flagellar hook length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.748
fliF-2
Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.725
fliY
Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.717
ACS41006.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.710
fliL-2
Flagellar fliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.703
ACS38297.1
Conserved hypothetical protein with putative exported protein, tetratricopeptide TPR_4 domain; Homologs of previously reported genes of unknown function.
  
 
   0.688
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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