STRINGSTRING
ACS42135.1 ACS42135.1 ACS42134.1 ACS42134.1 ACS42132.1 ACS42132.1 vapC vapC emrB emrB ACS42133.1 ACS42133.1 ACS39882.1 ACS39882.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS42135.1Hypothetical protein; No homology to any previously reported sequences. (211 aa)    
Predicted Functional Partners:
ACS42134.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.534
ACS42132.1
Putative integral membrane sensor signal transduction histidine kinase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
    0.518
vapC
Conserved hypothetical protein with putative PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.494
emrB
Multidrug efflux system protein; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
     0.480
ACS42133.1
Putative phoP: DNA-binding response regulator in two-component regulatory system with PhoQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.472
ACS39882.1
Hypothetical protein, putative 5'-nucleotidase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.454
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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