STRINGSTRING
potI potI potH potH potG potG cysA cysA tmk tmk cysA-2 cysA-2 holB holB ACS42215.1 ACS42215.1 ACS42444.1 ACS42444.1 engA engA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potIPutrescine transporter, membrane component of ABC transporter; Function of strongly homologous gene; transporter. (259 aa)    
Predicted Functional Partners:
potH
Putrescine transporter, membrane component of ABC transporter; Function of strongly homologous gene; transporter.
 
0.999
potG
Putrescine transporter, ATP-binding component of ABC transporter; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
 0.998
cysA
Putative sulfate/thiosulfate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.
  
 0.907
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.690
cysA-2
ABC transporter, ATPase, putative sulfate/thiosulfate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
   
 0.650
holB
DNA polymerase III, delta prime subunit; Function of strongly homologous gene; putative enzyme.
       0.608
ACS42215.1
Putative DNA-binding transcriptional dual regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.599
ACS42444.1
Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
   
    0.545
engA
GTP-binding protein EngA, GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
   
    0.519
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.