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potH potH potI potI potG potG cysA cysA cysA-2 cysA-2 tmk tmk holB holB ACS42215.1 ACS42215.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potHPutrescine transporter, membrane component of ABC transporter; Function of strongly homologous gene; transporter. (334 aa)    
Predicted Functional Partners:
potI
Putrescine transporter, membrane component of ABC transporter; Function of strongly homologous gene; transporter.
 
0.999
potG
Putrescine transporter, ATP-binding component of ABC transporter; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 0.998
cysA
Putative sulfate/thiosulfate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.
 
 0.921
cysA-2
ABC transporter, ATPase, putative sulfate/thiosulfate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
   
 0.683
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.631
holB
DNA polymerase III, delta prime subunit; Function of strongly homologous gene; putative enzyme.
       0.608
ACS42215.1
Putative DNA-binding transcriptional dual regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.599
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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