Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS42263.1 | ACS42264.1 | MexAM1_META1p4634 | MexAM1_META1p4635 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
| ACS42263.1 | ate | MexAM1_META1p4634 | MexAM1_META1p4636 | Hypothetical protein; No homology to any previously reported sequences. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.485 |
| ACS42263.1 | hemB | MexAM1_META1p4634 | MexAM1_META1p4633 | Hypothetical protein; No homology to any previously reported sequences. | Porphobilinogen synthase; Function of strongly homologous gene; enzyme; Belongs to the ALAD family. | 0.677 |
| ACS42264.1 | ACS42263.1 | MexAM1_META1p4635 | MexAM1_META1p4634 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
| ACS42264.1 | ate | MexAM1_META1p4635 | MexAM1_META1p4636 | Hypothetical protein; No homology to any previously reported sequences. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.637 |
| ACS42264.1 | hemB | MexAM1_META1p4635 | MexAM1_META1p4633 | Hypothetical protein; No homology to any previously reported sequences. | Porphobilinogen synthase; Function of strongly homologous gene; enzyme; Belongs to the ALAD family. | 0.683 |
| ACS42266.1 | ACS42267.1 | MexAM1_META1p4637 | MexAM1_META1p4638 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, putative transcriptional regulator; Homologs of previously reported genes of unknown function. | 0.952 |
| ACS42266.1 | ate | MexAM1_META1p4637 | MexAM1_META1p4636 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.543 |
| ACS42267.1 | ACS42266.1 | MexAM1_META1p4638 | MexAM1_META1p4637 | Conserved hypothetical protein, putative transcriptional regulator; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.952 |
| ACS42267.1 | ate | MexAM1_META1p4638 | MexAM1_META1p4636 | Conserved hypothetical protein, putative transcriptional regulator; Homologs of previously reported genes of unknown function. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.543 |
| ACS42341.1 | ate | MexAM1_META1p4713 | MexAM1_META1p4636 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.596 |
| ACS42341.1 | clpS | MexAM1_META1p4713 | MexAM1_META1p5258 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.444 |
| aat | ate | MexAM1_META1p0867 | MexAM1_META1p4636 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.562 |
| aat | clpS | MexAM1_META1p0867 | MexAM1_META1p5258 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.789 |
| ate | ACS42263.1 | MexAM1_META1p4636 | MexAM1_META1p4634 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein; No homology to any previously reported sequences. | 0.485 |
| ate | ACS42264.1 | MexAM1_META1p4636 | MexAM1_META1p4635 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein; No homology to any previously reported sequences. | 0.637 |
| ate | ACS42266.1 | MexAM1_META1p4636 | MexAM1_META1p4637 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.543 |
| ate | ACS42267.1 | MexAM1_META1p4636 | MexAM1_META1p4638 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Conserved hypothetical protein, putative transcriptional regulator; Homologs of previously reported genes of unknown function. | 0.543 |
| ate | ACS42341.1 | MexAM1_META1p4636 | MexAM1_META1p4713 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.596 |
| ate | aat | MexAM1_META1p4636 | MexAM1_META1p0867 | Putative arginyl-tRNA--protein transferase (R- transferase) (Arginyltransferase); Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.562 |
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