STRINGSTRING
ACS42292.1 ACS42292.1 ACS39663.1 ACS39663.1 pufB pufB ACS42867.1 ACS42867.1 pufC pufC ACS42864.1 ACS42864.1 ACS40674.1 ACS40674.1 ACS42868.1 ACS42868.1 ACS42290.1 ACS42290.1 ACS38652.1 ACS38652.1 pufA pufA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS42292.1Alpha/beta hydrolase related; Function of strongly homologous gene; enzyme. (342 aa)    
Predicted Functional Partners:
ACS39663.1
Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.785
pufB
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
     0.533
ACS42867.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.516
pufC
Photosynthetic reaction center cytochrome c subunit-related; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
  
     0.508
ACS42864.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.493
ACS40674.1
Putative hydroxyneurosporene dehydrogenase (Hydroxyneurosporene synthase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.479
ACS42868.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.469
ACS42290.1
Putative Short-chain specific acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   0.426
ACS38652.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.414
pufA
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
     0.411
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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