STRINGSTRING
ACS42296.1 ACS42296.1 oppB oppB ACS42298.1 ACS42298.1 ACS41780.1 ACS41780.1 ACS41779.1 ACS41779.1 ACS41778.1 ACS41778.1 ACS41781.1 ACS41781.1 yejF yejF ACS38333.1 ACS38333.1 ACS38199.1 ACS38199.1 yejE yejE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS42296.1Putative ABC transporter protein, periplasmic substrate-binding component (tat pathway signal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (532 aa)    
Predicted Functional Partners:
oppB
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.999
ACS42298.1
Oligopeptide transport system permease protein; Function of strongly homologous gene; carrier.
 
 0.997
ACS41780.1
Putative Oligopeptide/dipeptide ABC transporter, membrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.928
ACS41779.1
Putative Oligopeptide/dipeptide ABC transporter, membrane component (ddpC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.879
ACS41778.1
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.
  
 0.815
ACS41781.1
Putative ABC transporter, substrate-binding protein (tat pathway signal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.760
yejF
Oligopeptide transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
  
 0.705
ACS38333.1
Putative ABC transporter, fused tandem ATPase and permease domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.622
ACS38199.1
Putative ABC transporter, permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.602
yejE
Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.570
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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