STRINGSTRING
fixR fixR ACS42323.1 ACS42323.1 ACS42324.1 ACS42324.1 ACS42325.1 ACS42325.1 fixK fixK flaF flaF flbT flbT fixL fixL fixL-2 fixL-2 fixJ fixJ fixJ-2 fixJ-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixRShort-chain dehydrogenase/reductase SDR; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (241 aa)    
Predicted Functional Partners:
ACS42323.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 9352903.
       0.800
ACS42324.1
Putative GDP-mannose mannosyl hydrolase (nudD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the Nudix hydrolase family.
       0.797
ACS42325.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.797
fixK
Putative transcriptional regulator, Crp/Fnr family [; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.742
flaF
Flagellar protein FlaF; Function of strongly homologous gene; regulator.
      
 0.667
flbT
Flagellum biosynthesis repressor protein FlbT; Function of strongly homologous gene; regulator.
      
 0.660
fixL
Two component low oxygen sensor histidine kinase with PAS domains, FixL; Function of strongly homologous gene; enzyme.
      
 0.608
fixL-2
Two component low oxygen sensor histidine kinase with PAS domains; Function of strongly homologous gene; enzyme.
      
 0.608
fixJ
Transcriptional regulatory protein fixJ; Function of strongly homologous gene; regulator.
      
 0.607
fixJ-2
Two component transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
      
 0.607
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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