STRINGSTRING
ACS42427.1 ACS42427.1 ACS42094.1 ACS42094.1 ACS38222.1 ACS38222.1 ACS42428.1 ACS42428.1 ACS42426.1 ACS42426.1 ACS42425.1 ACS42425.1 rpoA rpoA ACS38067.1 ACS38067.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS42427.1Hypothetical protein; No homology to any previously reported sequences. (299 aa)    
Predicted Functional Partners:
ACS42094.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.722
ACS38222.1
Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.606
ACS42428.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.518
ACS42426.1
Hypothetical protein; No homology to any previously reported sequences.
       0.516
ACS42425.1
Putative cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.504
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.501
ACS38067.1
Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.458
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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