Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS39796.1 | ACS42444.1 | MexAM1_META1p1987 | MexAM1_META1p4833 | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.871 |
| ACS39796.1 | hslU | MexAM1_META1p1987 | MexAM1_META1p0471 | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.826 |
| ACS39796.1 | hslV | MexAM1_META1p1987 | MexAM1_META1p0470 | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.803 |
| ACS42264.1 | ACS42444.1 | MexAM1_META1p4635 | MexAM1_META1p4833 | Hypothetical protein; No homology to any previously reported sequences. | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.781 |
| ACS42444.1 | ACS39796.1 | MexAM1_META1p4833 | MexAM1_META1p1987 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | 0.871 |
| ACS42444.1 | ACS42264.1 | MexAM1_META1p4833 | MexAM1_META1p4635 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Hypothetical protein; No homology to any previously reported sequences. | 0.781 |
| ACS42444.1 | hslU | MexAM1_META1p4833 | MexAM1_META1p0471 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.765 |
| ACS42444.1 | hslV | MexAM1_META1p4833 | MexAM1_META1p0470 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.812 |
| ACS42444.1 | rplQ | MexAM1_META1p4833 | MexAM1_META1p2166 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal subunit protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure. | 0.798 |
| ACS42444.1 | rplS | MexAM1_META1p4833 | MexAM1_META1p5186 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.836 |
| ACS42444.1 | rplX | MexAM1_META1p4833 | MexAM1_META1p2181 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal subunit protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.763 |
| ACS42444.1 | rplY | MexAM1_META1p4833 | MexAM1_META1p2440 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L25 (General stress protein CTC); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.746 |
| ACS42444.1 | rpmB | MexAM1_META1p4833 | MexAM1_META1p3182 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | 0.765 |
| ACS42444.1 | rpmH | MexAM1_META1p4833 | MexAM1_META1p2356 | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal subunit protein L34; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL34 family. | 0.759 |
| hslU | ACS39796.1 | MexAM1_META1p0471 | MexAM1_META1p1987 | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | 0.826 |
| hslU | ACS42444.1 | MexAM1_META1p0471 | MexAM1_META1p4833 | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.765 |
| hslU | hslV | MexAM1_META1p0471 | MexAM1_META1p0470 | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| hslV | ACS39796.1 | MexAM1_META1p0470 | MexAM1_META1p1987 | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | 0.803 |
| hslV | ACS42444.1 | MexAM1_META1p0470 | MexAM1_META1p4833 | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.812 |
| hslV | hslU | MexAM1_META1p0470 | MexAM1_META1p0471 | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.999 |
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