Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40206.1 | ACS42514.1 | MexAM1_META1p2425 | MexAM1_META1p4905 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.554 |
ACS41167.1 | ACS42514.1 | MexAM1_META1p3430 | MexAM1_META1p4905 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.560 |
ACS42512.1 | ACS42513.1 | MexAM1_META1p4903 | MexAM1_META1p4904 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.925 |
ACS42512.1 | ACS42514.1 | MexAM1_META1p4903 | MexAM1_META1p4905 | Hypothetical protein; No homology to any previously reported sequences. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.608 |
ACS42513.1 | ACS42512.1 | MexAM1_META1p4904 | MexAM1_META1p4903 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.925 |
ACS42513.1 | ACS42514.1 | MexAM1_META1p4904 | MexAM1_META1p4905 | Hypothetical protein; No homology to any previously reported sequences. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.619 |
ACS42514.1 | ACS40206.1 | MexAM1_META1p4905 | MexAM1_META1p2425 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.554 |
ACS42514.1 | ACS41167.1 | MexAM1_META1p4905 | MexAM1_META1p3430 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.560 |
ACS42514.1 | ACS42512.1 | MexAM1_META1p4905 | MexAM1_META1p4903 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.608 |
ACS42514.1 | ACS42513.1 | MexAM1_META1p4905 | MexAM1_META1p4904 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.619 |
ACS42514.1 | argB | MexAM1_META1p4905 | MexAM1_META1p2345 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.725 |
ACS42514.1 | ecfG1 | MexAM1_META1p4905 | MexAM1_META1p4906 | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | RNA polymerase sigma factor; Function experimentally demonstrated in the studied strain; factor. | 0.423 |
argB | ACS42514.1 | MexAM1_META1p2345 | MexAM1_META1p4905 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.725 |
ecfG1 | ACS42514.1 | MexAM1_META1p4906 | MexAM1_META1p4905 | RNA polymerase sigma factor; Function experimentally demonstrated in the studied strain; factor. | Glutamine amidotransferase class II; Function of strongly homologous gene; enzyme. | 0.423 |