STRINGSTRING
ACS42526.1 ACS42526.1 secE secE ACS42709.1 ACS42709.1 ACS40608.1 ACS40608.1 ACS40699.1 ACS40699.1 ACS42491.1 ACS42491.1 ACS38791.1 ACS38791.1 ACS39836.1 ACS39836.1 lptD lptD rpsU rpsU ACS41735.1 ACS41735.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS42526.1Transcriptional regulator (Ros/MucR family); Function of strongly homologous gene; regulator. (176 aa)    
Predicted Functional Partners:
secE
Preprotein translocase subunit SecE-like protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.602
ACS42709.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.576
ACS40608.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.534
ACS40699.1
Conserved hypothetical protein, UPF0335 protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0335 family.
  
     0.525
ACS42491.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.516
ACS38791.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.505
ACS39836.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.495
lptD
Putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.478
rpsU
Ribosomal protein S21; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.462
ACS41735.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.448
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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