Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS38032.1 | ACS42227.1 | MexAM1_META1p0064 | MexAM1_META1p4598 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Succinate-semialdehyde dehydrogenase I, NADP-dependent (gabD-like); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.429 |
| ACS38032.1 | ACS42540.1 | MexAM1_META1p0064 | MexAM1_META1p4933 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.584 |
| ACS38032.1 | aldA | MexAM1_META1p0064 | MexAM1_META1p3652 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.429 |
| ACS40230.1 | ACS42540.1 | MexAM1_META1p2451 | MexAM1_META1p4933 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.521 |
| ACS42227.1 | ACS38032.1 | MexAM1_META1p4598 | MexAM1_META1p0064 | Succinate-semialdehyde dehydrogenase I, NADP-dependent (gabD-like); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.429 |
| ACS42227.1 | ACS42540.1 | MexAM1_META1p4598 | MexAM1_META1p4933 | Succinate-semialdehyde dehydrogenase I, NADP-dependent (gabD-like); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.465 |
| ACS42538.1 | ACS42539.1 | MexAM1_META1p4931 | MexAM1_META1p4932 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
| ACS42538.1 | ACS42540.1 | MexAM1_META1p4931 | MexAM1_META1p4933 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.456 |
| ACS42539.1 | ACS42538.1 | MexAM1_META1p4932 | MexAM1_META1p4931 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.773 |
| ACS42539.1 | ACS42540.1 | MexAM1_META1p4932 | MexAM1_META1p4933 | Hypothetical protein; No homology to any previously reported sequences. | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.456 |
| ACS42540.1 | ACS38032.1 | MexAM1_META1p4933 | MexAM1_META1p0064 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.584 |
| ACS42540.1 | ACS40230.1 | MexAM1_META1p4933 | MexAM1_META1p2451 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.521 |
| ACS42540.1 | ACS42227.1 | MexAM1_META1p4933 | MexAM1_META1p4598 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Succinate-semialdehyde dehydrogenase I, NADP-dependent (gabD-like); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.465 |
| ACS42540.1 | ACS42538.1 | MexAM1_META1p4933 | MexAM1_META1p4931 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.456 |
| ACS42540.1 | ACS42539.1 | MexAM1_META1p4933 | MexAM1_META1p4932 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.456 |
| ACS42540.1 | ACS42541.1 | MexAM1_META1p4933 | MexAM1_META1p4934 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein precursor; Homologs of previously reported genes of unknown function. | 0.475 |
| ACS42540.1 | aldA | MexAM1_META1p4933 | MexAM1_META1p3652 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.465 |
| ACS42540.1 | croR | MexAM1_META1p4933 | MexAM1_META1p3675 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Crotonase; Involved in the regeneration of glyoxylate from a molecule of acetyl-CoA. | 0.423 |
| ACS42540.1 | meaC | MexAM1_META1p4933 | MexAM1_META1p4153 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Mesaconyl-CoA hydratase; Part of the glyoxylate regeneration cycle that is essential for growth on C1 and C2 compounds; Function experimentally demonstrated in the studied strain; enzyme. | 0.423 |
| ACS42540.1 | recA | MexAM1_META1p4933 | MexAM1_META1p2721 | Putative ABC transporter, fused permease and ATPase components, putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.663 |
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