Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS41829.1 | ACS42613.1 | MexAM1_META1p4188 | MexAM1_META1p5009 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.404 |
ACS42300.1 | ACS42613.1 | MexAM1_META1p4672 | MexAM1_META1p5009 | Major facilitator superfamily MFS-1, putative sugar transport protein; Function of strongly homologous gene; transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.433 |
ACS42612.1 | ACS42613.1 | MexAM1_META1p5008 | MexAM1_META1p5009 | Putative inositol mono-phosphatase (suhB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.605 |
ACS42613.1 | ACS41829.1 | MexAM1_META1p5009 | MexAM1_META1p4188 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.404 |
ACS42613.1 | ACS42300.1 | MexAM1_META1p5009 | MexAM1_META1p4672 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Major facilitator superfamily MFS-1, putative sugar transport protein; Function of strongly homologous gene; transporter. | 0.433 |
ACS42613.1 | ACS42612.1 | MexAM1_META1p5009 | MexAM1_META1p5008 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative inositol mono-phosphatase (suhB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.605 |
ACS42613.1 | pncB | MexAM1_META1p5009 | MexAM1_META1p5011 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Nicotinate phosphoribosyltransferase (NAPRTase); Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.449 |
ACS42613.1 | ybgL | MexAM1_META1p5009 | MexAM1_META1p5010 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.433 |
pncB | ACS42613.1 | MexAM1_META1p5011 | MexAM1_META1p5009 | Nicotinate phosphoribosyltransferase (NAPRTase); Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.449 |
pncB | ybgL | MexAM1_META1p5011 | MexAM1_META1p5010 | Nicotinate phosphoribosyltransferase (NAPRTase); Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Hypothetical UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.768 |
ybgL | ACS42613.1 | MexAM1_META1p5010 | MexAM1_META1p5009 | Hypothetical UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.433 |
ybgL | pncB | MexAM1_META1p5010 | MexAM1_META1p5011 | Hypothetical UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Nicotinate phosphoribosyltransferase (NAPRTase); Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.768 |