STRINGSTRING
kgtP kgtP rpmE rpmE rpmJ rpmJ ribE-2 ribE-2 ACS42919.1 ACS42919.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
kgtPAlpha-ketoglutarate permease (MFS transporter membrane protein); Function of homologous gene experimentally demonstrated in an other organism; transporter. (451 aa)    
Predicted Functional Partners:
rpmE
50S ribosomal protein L31; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL31 family.
   
    0.764
rpmJ
50S ribosomal protein L36; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.714
ribE-2
Riboflavin synthase, alpha subunit; Function of strongly homologous gene; enzyme.
   
    0.594
ACS42919.1
Putative tartrate transporter ttuB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.451
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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