Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38936.1 | ACS39026.1 | MexAM1_META1p1042 | MexAM1_META1p1154 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.929 |
ACS38936.1 | ACS42284.1 | MexAM1_META1p1042 | MexAM1_META1p4655 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS38936.1 | ACS42739.1 | MexAM1_META1p1042 | MexAM1_META1p5135 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.928 |
ACS39026.1 | ACS38936.1 | MexAM1_META1p1154 | MexAM1_META1p1042 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.929 |
ACS39026.1 | ACS42284.1 | MexAM1_META1p1154 | MexAM1_META1p4655 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS39026.1 | ACS42739.1 | MexAM1_META1p1154 | MexAM1_META1p5135 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.902 |
ACS42284.1 | ACS38936.1 | MexAM1_META1p4655 | MexAM1_META1p1042 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS42284.1 | ACS39026.1 | MexAM1_META1p4655 | MexAM1_META1p1154 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS42284.1 | ACS42739.1 | MexAM1_META1p4655 | MexAM1_META1p5135 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS42739.1 | ACS38936.1 | MexAM1_META1p5135 | MexAM1_META1p1042 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.928 |
ACS42739.1 | ACS39026.1 | MexAM1_META1p5135 | MexAM1_META1p1154 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.902 |
ACS42739.1 | ACS42284.1 | MexAM1_META1p5135 | MexAM1_META1p4655 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.665 |
ACS42739.1 | ACS42741.1 | MexAM1_META1p5135 | MexAM1_META1p5137 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.475 |
ACS42739.1 | ttuC | MexAM1_META1p5135 | MexAM1_META1p5136 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.752 |
ACS42741.1 | ACS42739.1 | MexAM1_META1p5137 | MexAM1_META1p5135 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.475 |
ACS42741.1 | ttuC | MexAM1_META1p5137 | MexAM1_META1p5136 | Hypothetical protein; No homology to any previously reported sequences. | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.487 |
ttuC | ACS42739.1 | MexAM1_META1p5136 | MexAM1_META1p5135 | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.752 |
ttuC | ACS42741.1 | MexAM1_META1p5136 | MexAM1_META1p5137 | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.487 |