Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS42788.1 | ACS42790.1 | MexAM1_META1p5185 | MexAM1_META1p5187 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.429 |
ACS42788.1 | ACS42791.1 | MexAM1_META1p5185 | MexAM1_META1p5188 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | 0.429 |
ACS42788.1 | rplS | MexAM1_META1p5185 | MexAM1_META1p5186 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.454 |
ACS42790.1 | ACS42788.1 | MexAM1_META1p5187 | MexAM1_META1p5185 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.429 |
ACS42790.1 | ACS42791.1 | MexAM1_META1p5187 | MexAM1_META1p5188 | Hypothetical protein; No homology to any previously reported sequences. | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | 0.773 |
ACS42790.1 | rplS | MexAM1_META1p5187 | MexAM1_META1p5186 | Hypothetical protein; No homology to any previously reported sequences. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.741 |
ACS42791.1 | ACS42788.1 | MexAM1_META1p5188 | MexAM1_META1p5185 | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.429 |
ACS42791.1 | ACS42790.1 | MexAM1_META1p5188 | MexAM1_META1p5187 | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
ACS42791.1 | rplS | MexAM1_META1p5188 | MexAM1_META1p5186 | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.741 |
rplS | ACS42788.1 | MexAM1_META1p5186 | MexAM1_META1p5185 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.454 |
rplS | ACS42790.1 | MexAM1_META1p5186 | MexAM1_META1p5187 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Hypothetical protein; No homology to any previously reported sequences. | 0.741 |
rplS | ACS42791.1 | MexAM1_META1p5186 | MexAM1_META1p5188 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | DNA polymerase, beta domain protein region; Function of strongly homologous gene; enzyme. | 0.741 |