STRINGSTRING
ACS42806.1 ACS42806.1 tolB tolB ACS42583.1 ACS42583.1 ACS42805.1 ACS42805.1 ACS42931.1 ACS42931.1 phyR phyR ynfM ynfM ACS41441.1 ACS41441.1 cpoB cpoB ACS38275.1 ACS38275.1 ACS42353.1 ACS42353.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS42806.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (729 aa)    
Predicted Functional Partners:
tolB
Protein tolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.781
ACS42583.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.604
ACS42805.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.550
ACS42931.1
Putative hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.532
phyR
PhyR; Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However, it is not known whether this regulation is direct or indirect. Also induces several dehydrogenases.
  
 
 
 0.510
ynfM
Inner membrane transport protein ynfM; Function of strongly homologous gene; transporter.
       0.505
ACS41441.1
Putative transcriptional regulator, Crp/Fnr family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.501
cpoB
Conserved hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
  
 0.492
ACS38275.1
Response regulator receiver protein.
  
 
 
 0.491
ACS42353.1
Putative endonuclease/exonuclease/phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  
 0.472
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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