STRINGSTRING
ybgC ybgC ACS39663.1 ACS39663.1 acpP acpP ACS38002.1 ACS38002.1 fabD fabD ACS39374.1 ACS39374.1 ACS42824.1 ACS42824.1 ACS41189.1 ACS41189.1 tolQ tolQ tolB tolB fliG fliG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ybgCacyl-CoA thioesterase; Function of strongly homologous gene; enzyme. (143 aa)    
Predicted Functional Partners:
ACS39663.1
Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.974
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.621
ACS38002.1
[acyl-carrier-protein] S-malonyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.547
fabD
malonyl-CoA-[acyl-carrier-protein] transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.547
ACS39374.1
Membrane spanning protein in TonB-ExbB-ExbD complex; Function of strongly homologous gene; membrane component.
 
  
 0.534
ACS42824.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.517
ACS41189.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.480
tolQ
Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.470
tolB
Protein tolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.464
fliG
Flagellar motor switch protein FliG; Function of strongly homologous gene; structure.
    
   0.459
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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