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PA1208 PA1208 PA1537 PA1537 PA0830 PA0830 PA1542 PA1542 PA3586 PA3586 PA2120 PA2120 PA2475 PA2475 desB desB atuH atuH PA3331 PA3331 kefB kefB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PA1208Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). (499 aa)    
Predicted Functional Partners:
PA1537
Probable short-chain dehydrogenase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.676
PA0830
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
 
    0.664
PA1542
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
 
    0.626
PA3586
Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.554
PA2120
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
  
    0.533
PA2475
Probable cytochrome P450; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene); Belongs to the cytochrome P450 family.
 
 
 0.509
desB
acyl-CoA delta-9-desaturase, DesB; Class 1: Function experimentally demonstrated in P. aeruginosa.
  
   
 0.508
atuH
Putative very-long chain acyl-CoA synthetase; Class 4: Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences.
  
  
 0.499
PA3331
Cytochrome P450; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the cytochrome P450 family.
 
 
 0.495
kefB
Glutathione-regulated potassium-efflux system protein KefB; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.480
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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