Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA1495 | PA1496 | PA1495 | PA1496 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable potassium channel; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.791 |
| PA1495 | PA1497 | PA1495 | PA1497 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.606 |
| PA1496 | PA1495 | PA1496 | PA1495 | Probable potassium channel; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.791 |
| PA1496 | PA1497 | PA1496 | PA1497 | Probable potassium channel; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.612 |
| PA1497 | PA1495 | PA1497 | PA1495 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.606 |
| PA1497 | PA1496 | PA1497 | PA1496 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Probable potassium channel; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.612 |
| PA1497 | amtB | PA1497 | PA5287 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Ammonium transporter AmtB; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.809 |
| PA1497 | mtlZ | PA1497 | PA2344 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Fructokinase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.768 |
| PA1497 | ureB | PA1497 | PA4867 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease beta subunit; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the urease beta subunit family. | 0.878 |
| PA1497 | ureC | PA1497 | PA4868 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.947 |
| PA1497 | ureD | PA1497 | PA4864 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.747 |
| PA1497 | ureE | PA1497 | PA4891 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.946 |
| PA1497 | ureF | PA1497 | PA4892 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.855 |
| PA1497 | ureG | PA1497 | PA4893 | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.913 |
| amtB | PA1497 | PA5287 | PA1497 | Ammonium transporter AmtB; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.809 |
| amtB | ureC | PA5287 | PA4868 | Ammonium transporter AmtB; Product name confidence: Class 2 (High similarity to functionally studied protein). | Urease alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.448 |
| amtB | ureE | PA5287 | PA4891 | Ammonium transporter AmtB; Product name confidence: Class 2 (High similarity to functionally studied protein). | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.778 |
| amtB | ureG | PA5287 | PA4893 | Ammonium transporter AmtB; Product name confidence: Class 2 (High similarity to functionally studied protein). | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.501 |
| mtlZ | PA1497 | PA2344 | PA1497 | Fructokinase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.768 |
| mtlZ | ureC | PA2344 | PA4868 | Fructokinase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Urease alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.513 |
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