STRINGSTRING
AEF99296.1 AEF99296.1 AEF99158.1 AEF99158.1 AEF99290.1 AEF99290.1 AEF99295.1 AEF99295.1 AEF99293.1 AEF99293.1 AEF99294.1 AEF99294.1 clpP clpP AEF99292.1 AEF99292.1 AEF99291.1 AEF99291.1 AEF99289.1 AEF99289.1 AEG01812.1 AEG01812.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF99296.1TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: pau:PA14_01100 putative ClpA/B-type chaperone; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family. (906 aa)    
Predicted Functional Partners:
AEF99158.1
PFAM: Protein of unknown function DUF877; KEGG: nde:NIDE2011 hypothetical protein.
 
 
 0.976
AEF99290.1
KEGG: psl:Psta_1832 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
 
 0.973
AEF99295.1
KEGG: psl:Psta_1837 type VI secretion protein, VC_A0111 family; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305.
 
  
 0.951
AEF99293.1
KEGG: xac:XAC4143 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25.
 
  
 0.948
AEF99294.1
KEGG: psl:Psta_1836 type VI secretion protein, VC_A0110 family; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.945
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.945
AEF99292.1
PFAM: virulence protein, SciE type; KEGG: psl:Psta_1834 virulence protein SciE type.
 
    0.935
AEF99291.1
KEGG: azo:azo3897 putative cytoplasmic protein SciM; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus.
 
  
 0.926
AEF99289.1
Type VI secretion protein, VC_A0107 family; KEGG: azo:azo3895 putative cytoplasmic protein,SciH; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.907
AEG01812.1
KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal.
 
  
 0.906
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.