STRINGSTRING
Dret_2356 Dret_2356 Dret_2358 Dret_2358 Dret_2359 Dret_2359 Dret_2369 Dret_2369 Dret_1392 Dret_1392 Dret_1523 Dret_1523 Dret_0176 Dret_0176 Dret_0082 Dret_0082 Dret_2442 Dret_2442 Dret_0598 Dret_0598 Dret_0868 Dret_0868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Dret_2356Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: histidine kinase HAMP region domain protein; protein phosphatase 2C domain protein; KEGG: pau:PA14_02150 hypothetical protein. (679 aa)    
Predicted Functional Partners:
Dret_2358
KEGG: dde:Dde_3046 hypothetical protein.
 
  
 0.909
Dret_2359
PFAM: Domain of unknown function DUF1987; KEGG: dde:Dde_3045 hypothetical protein.
 
    0.879
Dret_2369
KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold- 3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; ATP- binding region ATPase domain protein.
 
 
 0.726
Dret_1392
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dma:DMR_13690 hypothetical protein.
  
 
 0.725
Dret_1523
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: kpu:KP1_1977 probable anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.725
Dret_0176
Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; CBS domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: dvm:DvMF_0617 diguanylate cyclase/phosphodiesterase.
 
  
 0.722
Dret_0082
KEGG: dal:Dalk_0107 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3; PAC repeat-containing protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; ATP-binding region ATPase domain protein.
 
 
 0.708
Dret_2442
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: dma:DMR_02070 putative response regulator receiver protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
  
 0.703
Dret_0598
PFAM: Flagellar protein FlgJ-like; KEGG: pca:Pcar_1152 putative FlgJ-like flagellar protein.
  
    0.672
Dret_0868
KEGG: dvl:Dvul_2720 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein.
  
 
 0.658
Your Current Organism:
Desulfohalobium retbaense
NCBI taxonomy Id: 485915
Other names: D. retbaense DSM 5692, Desulfohalobium retbaense DSM 5692, Desulfohalobium retbaense str. DSM 5692, Desulfohalobium retbaense strain DSM 5692
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