STRINGSTRING
Smal_3798 Smal_3798 Smal_0689 Smal_0689 Smal_3630 Smal_3630 Smal_3797 Smal_3797 Smal_2090 Smal_2090 Smal_3799 Smal_3799 Smal_0564 Smal_0564 Smal_2089 Smal_2089 Smal_2093 Smal_2093 Smal_0113 Smal_0113 Smal_3647 Smal_3647
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_3798KEGG: pau:PA14_04020 hypothetical protein. (199 aa)    
Predicted Functional Partners:
Smal_0689
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 0.815
Smal_3630
KEGG: xac:XAC0534 C-type cytochrome biogenesis protein (copper tolerance).
  
 
 0.778
Smal_3797
KEGG: csa:Csal_1496 hypothetical protein.
       0.776
Smal_2090
KEGG: swd:Swoo_4128 hypothetical protein.
  
     0.765
Smal_3799
PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_4502 transcriptional regulator, GntR family with aminotransferase domain.
       0.762
Smal_0564
PFAM: Fimbrial protein; KEGG: xfa:XF0077 fimbrial adhesin precursor.
  
     0.747
Smal_2089
KEGG: pfl:PFL_3119 hypothetical protein.
  
     0.747
Smal_2093
KEGG: cvi:CV_0689 hypothetical protein.
  
 
   0.720
Smal_0113
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: pst:PSPTO_3229 filamentous hemagglutinin, intein-containing, putative.
  
     0.712
Smal_3647
PFAM: protein of unknown function DUF1311; KEGG: atc:AGR_C_4360 hypothetical protein.
  
     0.694
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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