STRINGSTRING
Ajs_2114 Ajs_2114 Ajs_2113 Ajs_2113 Ajs_0743 Ajs_0743 Ajs_0612 Ajs_0612 Ajs_0244 Ajs_0244 Ajs_0745 Ajs_0745 Ajs_0246 Ajs_0246 Ajs_0608 Ajs_0608 Ajs_0609 Ajs_0609 Ajs_3128 Ajs_3128 Ajs_0611 Ajs_0611
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_2114TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pau:PA14_04080 putative permease of ABC transporter; TC 3.A.1.3.-. (230 aa)    
Predicted Functional Partners:
Ajs_2113
PFAM: extracellular solute-binding protein, family 3; KEGG: pau:PA14_04090 putative binding protein component of ABC transporter; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 0.998
Ajs_0743
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_A3014 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 0.965
Ajs_0612
L-glutamate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3901 ABC transporter related.
 
 0.934
Ajs_0244
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0403 ABC transporter related; TC 3.A.1.3.-.
 
 0.933
Ajs_0745
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2971 ABC transporter related; TC 3.A.1.3.-.
 
 0.931
Ajs_0246
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_0401 extracellular solute-binding protein, family 3; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
 0.899
Ajs_0608
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: reu:Reut_A2361 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 
 0.826
Ajs_0609
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_3904 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 
 0.812
Ajs_3128
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2128 probable ATP-binding component of ABC transporter; TC 3.A.1.3.-; Belongs to the ABC transporter superfamily.
 
 0.666
Ajs_0611
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3902 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-.
 
   
0.520
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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