STRINGSTRING
Spro_2316 Spro_2316 Spro_2317 Spro_2317 macB macB macB-2 macB-2 flgK flgK Spro_1598 Spro_1598 Spro_4268 Spro_4268 hisI hisI Spro_1861 Spro_1861 Spro_2477 Spro_2477 Spro_3742 Spro_3742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Spro_2316PFAM: secretion protein HlyD family protein; KEGG: pau:PA14_10350 putative secretion protein. (431 aa)    
Predicted Functional Partners:
Spro_2317
ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bps:BPSL3093 colicin V processing peptidase.
 
 
 0.990
macB
ABC transporter-related protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.685
macB-2
ABC transporter-related protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.685
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: yen:YE2551 flagellar hook-associated protein 1.
      
 0.551
Spro_1598
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: plu:plu0659 outer membrane protein PrtD.
  
 
 0.506
Spro_4268
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ent:Ent638_3448 type I secretion outer membrane protein, TolC family.
  
 
 0.506
hisI
PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: yen:YE2772 histidine biosynthesis bifunctional protein [includes: phosphoribosyl-amp cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
 
    0.502
Spro_1861
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_2218 RND efflux system, outer membrane lipoprotein, NodT family.
  
 
 0.496
Spro_2477
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE0445 probable outer membrane efflux lipoprotein.
  
 
 0.496
Spro_3742
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE3241 probable outer membrane efflux protein.
  
 
 0.496
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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