STRINGSTRING
Amir_5732 Amir_5732 Amir_5731 Amir_5731 Amir_0833 Amir_0833 Amir_0935 Amir_0935 Amir_5729 Amir_5729 Amir_5730 Amir_5730 Amir_5693 Amir_5693 Amir_5728 Amir_5728 Amir_0670 Amir_0670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Amir_5732PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: pau:PA14_11940 hypothetical protein. (226 aa)    
Predicted Functional Partners:
Amir_5731
PFAM: NUDIX hydrolase; KEGG: dal:Dalk_4948 NUDIX hydrolase.
       0.791
Amir_0833
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein.
    
 0.748
Amir_0935
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ank:AnaeK_3014 UBA/ThiF-type NAD/FAD binding protein.
    
 0.748
Amir_5729
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.587
Amir_5730
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.587
Amir_5693
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
       0.483
Amir_5728
TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: pzu:PHZ_c2609 nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.464
Amir_0670
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: azc:AZC_2926 TPR repeat-containing protein.
 
     0.412
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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