STRINGSTRING
Oter_4276 Oter_4276 Oter_4275 Oter_4275 Oter_4274 Oter_4274 Oter_4273 Oter_4273 Oter_4277 Oter_4277 Oter_0954 Oter_0954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4276KEGG: pau:PA14_12530 hypothetical protein. (344 aa)    
Predicted Functional Partners:
Oter_4275
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1282 methyltransferase type 11.
 
     0.803
Oter_4274
PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: rci:RCIX763 putative transcription regulator (MarR family).
       0.662
Oter_4273
PFAM: Pectinesterase; lipolytic protein G-D-S-L family; KEGG: sus:Acid_1249 pectinesterase.
       0.540
Oter_4277
PFAM: regulatory protein LacI; KEGG: cmi:CMM_0251 putative transcriptional regulator, LacI-family.
       0.487
Oter_0954
TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bba:Bd0483 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.462
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.