STRINGSTRING
Maqu_0016 Maqu_0016 Maqu_0014 Maqu_0014 Maqu_0017 Maqu_0017 Maqu_0018 Maqu_0018 Maqu_0019 Maqu_0019 Maqu_0015 Maqu_0015 msrB msrB Maqu_3136 Maqu_3136 Maqu_3145 Maqu_3145
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0016KEGG: pau:PA14_12550 hypothetical protein. (130 aa)    
Predicted Functional Partners:
Maqu_0014
Conserved hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
     
 0.504
Maqu_0017
PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_01961 membrane-fusion protein.
       0.500
Maqu_0018
PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: dar:Daro_0987 ABC-2:ABC transporter related.
       0.500
Maqu_0019
PFAM: ABC-2 type transporter; KEGG: hch:HCH_01963 ABC-type multidrug transport system, permease component.
       0.500
Maqu_0015
PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: pae:PA1866 hypothetical protein.
       0.493
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
      
 0.420
Maqu_3136
PFAM: NnrS family protein; KEGG: net:Neut_0425 NnrS family protein.
  
  
 0.401
Maqu_3145
PFAM: NnrS family protein; KEGG: abo:ABO_2561 hypothetical protein.
  
  
 0.401
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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